You could probably special order the fiber without the outer jackets. This would be very small in diameter but also very delicate. Would you hang this around the perimeter or cut a groove into the blocks? Do your blocks expand and contract much with temperature change / moisture absorption?
The way I see it, you certainly do not need to be concerned with dB loss in this application. You're not transmitting and receiving data and based on the videos of your product, a breakage of the fiber will be a catastrophic breakage with a large chunk of it removed. I'll still stick with my LED transmitter / receiver setup recommendation.
Just curious, based upon your questions, are your customers not letting you know when the overruns need repaired. I can't imagine why you need a system to monitor this.
Shawn