At least you've got the basic components and instructions down on the page. That's a start.
FTTH gave you a good explanation of how the functions of a basic relay-ladder logic rung are developed, and how branches and boolean instructions perform if/then/else functions.
Firejo gave good advice about how RSLogix 500 (the editor for the MicroLogix "brick" controllers) requires you to place input and output instructions. Outputs have to be on the right side, and nothing can come to the right of them.
I will add a couple more:
The E-Stop is, as you said, hard-wired. While you can use a status contact as a PLC input to unlatch and reset your program, the actual source wire to the output terminals of the PLC has to pass through an e-stop button (more commonly a safety relay). That's a basic truth of automation: general-purpose software should never be used for safety purposes.
The function to sound a horn if the wire to the high-high level sensor is broken is another basic principle in automation: sometimes a broken wire needs to be detected, and the simplest way to do so is to use a normally-closed sensor.
Under ordinary circumstances, the High-High switch has a normally-closed contact that supplies voltage to a PLC input, so the PLC input data table point for that sensor is True (we also call that logic state High, or 1).
If the wire breaks, the input point goes False.
So how do you tell the difference between a broken wire and the actual High-High float switch being triggered ?
In your case, the easy way would be to check the status of the High and Low level switches. If water is floating both of them and they are both normally-open sensors, then you can deduce that the water level is over the High limit and the High-High switch is probably being triggered.
If either the High or Low switch is False, when the High-High input goes False, then you've probably detected a broken wire.
In real life there are complementary contacts (1 N.O, 1 N.C.) and pulse-test circuits that fulfill this function. But you're in class, so a discussion of likely failure modes and the limitations of simple sensors is appropriate.